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TE classification and submission scheme

Zhijian Tu, Jim Hogan, Jose Tubio and Frank Collins.

Web interface and database design

Chunhong Mao, Virginia Bioinformatics Institute

Annotation of TEs in Aedes aegypti

Compilation and initial classification of repeats
Brian Haas, TIGR and Zhijian Tu, Virginia Tech

Laboratories involved in TE annotation


LTR retrotransposons
Ty3/gypsy
Jose Tubio, Horacio Naveira and Javier Costas, Universidade de Santiago de Compostela
Pao/Bel
Javier Costas, Horacio Naveira, and Jose Tubio, Universidade de Santiago de Compostela
Ty1/copia
Song Li, Biochemistry, Virginia Tech
Non-LTR retrotransposons
Jim Biedler, Biochemistry, Virginia Tech
SINEs
Zhijian Tu, Biochemistry, Virginia Tech
DNA transposons
HAT transposons
Peter Arensburger and Peter Atkinson, UC Riverside.
P
Jim Hogan and Frank Collins, Biology, Notre Dame
PiggyBac
Jim Hogan and Frank Collins, Biology, Notre Dame
PIF
Zhijian Tu, Biochemistry, Virginia Tech
pogo
Zhijian Tu, Biochemistry, Virginia Tech
Hadi Quesneville, Institut Jacques Monod
DD37E
Zhijian Tu and Jim Biedler, Biochemistry, Virginia Tech
DD37D, DD41D
Zhijian Tu, Biochemistry, Virginia Tech
mariner
Jim Hogan and Frank Collins, Biology, Notre Dame
Zhijian Tu, Biochemistry, Virginia Tech
Hadi Quesneville, Institut Jacques Monod
Tc1
Monique Coy and Zhijian Tu, Biochemistry, Virginia Tech
MITEs
Zhijian Tu, Jim Bielder, Monique Coy, and Song Li, Biochemistry, Virginia Tech
Helitron
Zhijian Tu, Biochemistry, Virginia Tech
Overall coordination and checking for "composite" TEs
Zhijian Tu, Biochemistry, Virginia Tech